·
Biological
modeling and simulation
Molecular and cellular modeling,
stochastic and rule-based modeling, modeling languages and systems
·
Biomedical
image processing
Image segmentation and
classification, visualization, functional and molecular imaging
·
Biomedical
data and literature mining
Data integration, knowledge
discovery from electronic medical records and scientific literature
·
Computational genetic
epidemiology
Linkage and association analysis, gene-gene and
gene-environment interaction modeling, genetic risk analysis
·
Computational
metabolomics
Metabolomics databases,
metabolite identification, spectral analysis, metabolic network modeling
·
Computational
proteomics
Peptide identification and
quantification, post-translational modifications, protein-protein
interactions
·
Databases
and ontologies
Biomedical data warehouses,
database integration, biomedical ontologies and semantic web services
·
Gene
regulation
Regulatory motifs and modules,
post-transcriptional regulation, regulatory networks
·
Genome analysis
Genome assembly, genome annotation, comparative genomics,
metagenomics
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Health
Informatics
Medical data management and
privacy, medical recommender systems, therapy optimization
·
High-performance
bio-computing
Cloud and grid computing,
advanced multi-core, GPU, and FPGA biomedical applications
·
Immunoinformatics
Epitope prediction, vaccine
design, immune system simulators
·
Molecular
evolution
Models of evolution, reconstruction of phylogenetic trees
and networks, comparative genomics
·
Population genomics
Haplotype and recombination analysis, structural genomic
variation, signatures of natural selection
·
Sequence analysis
Multiple sequence alignment, motif discovery, sequence
search and clustering
·
Structural bioinformatics
RNA and protein structure prediction and classification,
molecular docking, RNA and protein design
·
Systems biology
Systems approaches to molecular biology, multi-scale
modeling, biological networks, synthetic biology
·
Transcriptomics
Microarray and sequencing-based
transcriptome profiling, novel transcript discovery, alternative
splicing, non-coding RNA analysis
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